Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 SOX15-203ENST00000570788 1093 ntBASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 PGM5P4-201ENST00000421970 445 ntBASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3RF2Q8TEC5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SH3RF2Q8TEC5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SH3RF2Q8TEC5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.2■□□□□ 0.99
SH3RF2Q8TEC5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SH3RF2Q8TEC5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 AP006294.2-201ENST00000641667 209 ntBASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3RF2Q8TEC5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3RF2Q8TEC5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 AL356652.1-201ENST00000615962 565 ntBASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 AC005229.4-201ENST00000610085 2198 ntBASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SH3RF2Q8TEC5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 KRT17P3-201ENST00000420566 1262 ntBASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3RF2Q8TEC5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms