Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AL359736.2-201ENST00000621992 437 ntBASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.47■■□□□ 1.03
SHKBP1Q8TBC3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 SOX15-203ENST00000570788 1093 ntBASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
SHKBP1Q8TBC3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 AL596275.1-201ENST00000423464 877 ntBASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 RPS2P4-201ENST00000476944 856 ntBASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 AC233263.1-201ENST00000578059 224 ntBASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHKBP1Q8TBC3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHKBP1Q8TBC3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 AC073130.3-201ENST00000624389 2278 ntBASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 C2orf69P4-201ENST00000565394 541 ntBASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 AC087633.2-202ENST00000565166 1439 ntBASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.43■■□□□ 1.02
SHKBP1Q8TBC3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms