Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
SMARCC2Q8TAQ2 AL162377.1-201ENST00000618844 1793 ntBASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SMARCC2Q8TAQ2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 NCF1B-203ENST00000435988 1254 ntBASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 AC007322.4-201ENST00000509611 723 ntBASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMARCC2Q8TAQ2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 AC068338.2-201ENST00000563278 1430 ntBASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
SMARCC2Q8TAQ2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 AL121832.2-201ENST00000610979 668 ntBASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 AL109923.1-201ENST00000618799 583 ntBASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 MIR2861-201ENST00000636310 90 ntBASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SMARCC2Q8TAQ2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 AL512408.1-201ENST00000569378 2000 ntBASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMARCC2Q8TAQ2 GPX1P1-201ENST00000388829 606 ntBASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMARCC2Q8TAQ2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMARCC2Q8TAQ2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms