Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 AC145285.6-201ENST00000604632 637 ntBASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 AL355355.2-201ENST00000442321 338 ntBASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 C11orf96-202ENST00000528572 1834 ntBASIC19.3■□□□□ 0.68
SNIP1Q8TAD8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 AC005363.2-201ENST00000618631 242 ntBASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 AC006557.6-201ENST00000623071 864 ntBASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNIP1Q8TAD8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNIP1Q8TAD8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.27■□□□□ 0.68
SNIP1Q8TAD8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNIP1Q8TAD8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SNIP1Q8TAD8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNIP1Q8TAD8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.27■□□□□ 0.67
SNIP1Q8TAD8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNIP1Q8TAD8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 AC087633.2-202ENST00000565166 1439 ntBASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms