Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP61Q8NHU2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CFAP61Q8NHU2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 AP001160.3-201ENST00000601484 763 ntBASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP61Q8NHU2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP61Q8NHU2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP61Q8NHU2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP61Q8NHU2 AL020996.1-203ENST00000536896 2307 ntBASIC20.58■□□□□ 0.88
CFAP61Q8NHU2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 KRT19P1-201ENST00000405746 1186 ntBASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP61Q8NHU2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC138932.1-201ENST00000534164 6830 ntBASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC061975.6-201ENST00000579045 1553 ntBASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC008175.2-201ENST00000612840 297 ntBASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP61Q8NHU2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP61Q8NHU2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP61Q8NHU2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms