Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCA6Q8N139 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
ABCA6Q8N139 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ABCA6Q8N139 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ABCA6Q8N139 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ABCA6Q8N139 AL355355.2-201ENST00000442321 338 ntBASIC30.58■■■□□ 2.49
ABCA6Q8N139 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.58■■■□□ 2.49
ABCA6Q8N139 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.58■■■□□ 2.49
ABCA6Q8N139 AC124283.5-201ENST00000624661 1809 ntBASIC30.58■■■□□ 2.49
ABCA6Q8N139 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
ABCA6Q8N139 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
ABCA6Q8N139 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
ABCA6Q8N139 ARMC10P1-201ENST00000313754 855 ntBASIC30.58■■■□□ 2.49
ABCA6Q8N139 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC30.58■■■□□ 2.49
ABCA6Q8N139 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
ABCA6Q8N139 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC30.57■■■□□ 2.48
ABCA6Q8N139 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.57■■■□□ 2.48
ABCA6Q8N139 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ABCA6Q8N139 AL390955.1-201ENST00000428694 934 ntBASIC30.57■■■□□ 2.48
ABCA6Q8N139 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ABCA6Q8N139 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC30.57■■■□□ 2.48
ABCA6Q8N139 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.57■■■□□ 2.48
ABCA6Q8N139 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC30.57■■■□□ 2.48
ABCA6Q8N139 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ABCA6Q8N139 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
ABCA6Q8N139 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC30.56■■■□□ 2.48
ABCA6Q8N139 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ABCA6Q8N139 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ABCA6Q8N139 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 AL031963.3-201ENST00000606441 850 ntBASIC30.55■■■□□ 2.48
ABCA6Q8N139 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.55■■■□□ 2.48
ABCA6Q8N139 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA6Q8N139 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA6Q8N139 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA6Q8N139 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA6Q8N139 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.54■■■□□ 2.48
ABCA6Q8N139 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ABCA6Q8N139 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA6Q8N139 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA6Q8N139 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA6Q8N139 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA6Q8N139 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ABCA6Q8N139 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC30.53■■■□□ 2.48
ABCA6Q8N139 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC30.53■■■□□ 2.48
ABCA6Q8N139 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
ABCA6Q8N139 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC30.53■■■□□ 2.48
ABCA6Q8N139 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC30.53■■■□□ 2.48
ABCA6Q8N139 EXOC3-AS1-202ENST00000623673 1663 ntBASIC30.53■■■□□ 2.48
ABCA6Q8N139 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 AC073508.3-201ENST00000619697 1419 ntBASIC30.52■■■□□ 2.48
ABCA6Q8N139 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ABCA6Q8N139 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 TREX2-204ENST00000370212 861 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 GLDC-219ENST00000640208 420 ntTSL 2 BASIC30.52■■■□□ 2.48
ABCA6Q8N139 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ABCA6Q8N139 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ABCA6Q8N139 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
ABCA6Q8N139 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
ABCA6Q8N139 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ABCA6Q8N139 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.51■■■□□ 2.48
ABCA6Q8N139 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30.51■■■□□ 2.48
ABCA6Q8N139 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.51■■■□□ 2.48
ABCA6Q8N139 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
ABCA6Q8N139 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ABCA6Q8N139 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
ABCA6Q8N139 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ABCA6Q8N139 UNC93B2-201ENST00000285383 730 ntBASIC30.51■■■□□ 2.47
ABCA6Q8N139 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.51■■■□□ 2.47
ABCA6Q8N139 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.51■■■□□ 2.47
ABCA6Q8N139 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.51■■■□□ 2.47
ABCA6Q8N139 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms