Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 MMP23A-201ENST00000234610 1017 ntBASIC28.66■■■□□ 2.18
XRN1Q8IZH2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
XRN1Q8IZH2 AC079598.2-202ENST00000546624 1451 ntBASIC28.66■■■□□ 2.18
XRN1Q8IZH2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC28.65■■■□□ 2.18
XRN1Q8IZH2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 HTR7P1-201ENST00000538670 1336 ntBASIC28.64■■■□□ 2.18
XRN1Q8IZH2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
XRN1Q8IZH2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.17
XRN1Q8IZH2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
XRN1Q8IZH2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC28.63■■■□□ 2.17
XRN1Q8IZH2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 AC124283.5-201ENST00000624661 1809 ntBASIC28.62■■■□□ 2.17
XRN1Q8IZH2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 FAM197Y1-201ENST00000421178 764 ntBASIC28.62■■■□□ 2.17
XRN1Q8IZH2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 DUT-205ENST00000558813 769 ntTSL 2 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 AL121906.2-201ENST00000621597 723 ntBASIC28.62■■■□□ 2.17
XRN1Q8IZH2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
XRN1Q8IZH2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
XRN1Q8IZH2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 AL049597.2-201ENST00000565575 961 ntBASIC28.6■■■□□ 2.17
XRN1Q8IZH2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 AP000525.1-201ENST00000608286 694 ntBASIC28.6■■■□□ 2.17
XRN1Q8IZH2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
XRN1Q8IZH2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 KRT18P57-201ENST00000443599 1254 ntBASIC28.59■■■□□ 2.17
XRN1Q8IZH2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
XRN1Q8IZH2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC28.58■■■□□ 2.17
XRN1Q8IZH2 AL355355.2-201ENST00000442321 338 ntBASIC28.58■■■□□ 2.17
XRN1Q8IZH2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC28.58■■■□□ 2.17
XRN1Q8IZH2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms