Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 AC024257.2-201ENST00000549699 147 ntBASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 AC133561.4-201ENST00000566112 224 ntBASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 AP004607.4-201ENST00000530158 1459 ntBASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM42Q8IWZ5 AC019069.1-201ENST00000610008 1333 ntBASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM42Q8IWZ5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 AC005837.3-201ENST00000612163 286 ntBASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 AL158211.5-201ENST00000623583 2518 ntBASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TRIM42Q8IWZ5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM42Q8IWZ5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM42Q8IWZ5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM42Q8IWZ5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM42Q8IWZ5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM42Q8IWZ5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 AC005224.4-201ENST00000583262 1652 ntBASIC20.26■□□□□ 0.83
TRIM42Q8IWZ5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM42Q8IWZ5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms