Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 KRT18P35-201ENST00000510488 1269 ntBASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 AL049597.2-201ENST00000565575 961 ntBASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 AC092053.2-201ENST00000640557 1818 ntBASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RP1L1Q8IWN7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RP1L1Q8IWN7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 AC068473.5-201ENST00000616428 2072 ntBASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RP1L1Q8IWN7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 AC091799.1-201ENST00000422823 811 ntBASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 PRKY-204ENST00000533551 1019 ntBASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 C2orf69P4-201ENST00000565394 541 ntBASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RP1L1Q8IWN7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RP1L1Q8IWN7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms