Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AL162377.1-201ENST00000618844 1793 ntBASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AL512408.1-201ENST00000569378 2000 ntBASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL3Q8IVW4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 AC087623.3-201ENST00000607047 1098 ntBASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 FAM21FP-204ENST00000608637 956 ntBASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL3Q8IVW4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.95■□□□□ 0.95
CDKL3Q8IVW4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL3Q8IVW4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 AC010536.3-201ENST00000620306 533 ntBASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL3Q8IVW4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 KRT18P11-201ENST00000435214 1283 ntBASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 TERF1P5-201ENST00000477545 1207 ntBASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL3Q8IVW4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms