Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.3■□□□□ 0.84
LCA5Q86VQ0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5Q86VQ0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 AC099778.1-201ENST00000568593 1911 ntBASIC20.29■□□□□ 0.84
LCA5Q86VQ0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCA5Q86VQ0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 AC110285.6-201ENST00000617652 491 ntBASIC20.28■□□□□ 0.84
LCA5Q86VQ0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCA5Q86VQ0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 SUDS3P1-201ENST00000505831 966 ntBASIC20.27■□□□□ 0.84
LCA5Q86VQ0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.27■□□□□ 0.84
LCA5Q86VQ0 AL020996.1-203ENST00000536896 2307 ntBASIC20.27■□□□□ 0.84
LCA5Q86VQ0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LCA5Q86VQ0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
LCA5Q86VQ0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LCA5Q86VQ0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5Q86VQ0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms