Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 AC087633.2-202ENST00000565166 1439 ntBASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 AL049597.2-201ENST00000565575 961 ntBASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 AC005829.2-201ENST00000571422 1056 ntBASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 AC120498.8-201ENST00000614275 531 ntBASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 AC116050.2-201ENST00000612102 1779 ntBASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13BQ7Z7G8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13BQ7Z7G8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 KRASP1-201ENST00000407852 552 ntBASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 NTF6B-201ENST00000591913 560 ntBASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 CYP2D8P-201ENST00000433633 1490 ntBASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13BQ7Z7G8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 TERF1P1-201ENST00000311003 1181 ntBASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.68□□□□□ -0.38
VPS13BQ7Z7G8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 574.6 ms