Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 SUDS3P1-201ENST00000505831 966 ntBASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCHD4Q6ZW05 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 AC012414.1-201ENST00000556676 535 ntBASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 AIRN-201ENST00000601203 4374 ntBASIC18.71■□□□□ 0.59
PTCHD4Q6ZW05 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
PTCHD4Q6ZW05 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 AC011484.1-201ENST00000377652 1995 ntBASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCHD4Q6ZW05 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCHD4Q6ZW05 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms