Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 AC087623.3-201ENST00000607047 1098 ntBASIC24.91■■□□□ 1.58
CASC1Q6TDU7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 AC004854.2-201ENST00000608450 1441 ntBASIC24.91■■□□□ 1.58
CASC1Q6TDU7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
CASC1Q6TDU7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 AC026271.2-201ENST00000428091 497 ntBASIC24.9■■□□□ 1.58
CASC1Q6TDU7 AC034268.1-201ENST00000441047 882 ntBASIC24.9■■□□□ 1.58
CASC1Q6TDU7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.9■■□□□ 1.58
CASC1Q6TDU7 AL121603.2-201ENST00000557373 2117 ntBASIC24.89■■□□□ 1.58
CASC1Q6TDU7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.89■■□□□ 1.58
CASC1Q6TDU7 AC243732.1-201ENST00000612648 864 ntBASIC24.89■■□□□ 1.58
CASC1Q6TDU7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.89■■□□□ 1.57
CASC1Q6TDU7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 KRT19P1-201ENST00000405746 1186 ntBASIC24.88■■□□□ 1.57
CASC1Q6TDU7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 SLC7A5P1-201ENST00000568957 537 ntBASIC24.88■■□□□ 1.57
CASC1Q6TDU7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 AL512408.1-201ENST00000569378 2000 ntBASIC24.88■■□□□ 1.57
CASC1Q6TDU7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CASC1Q6TDU7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 MIR2861-201ENST00000636310 90 ntBASIC24.87■■□□□ 1.57
CASC1Q6TDU7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.87■■□□□ 1.57
CASC1Q6TDU7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.86■■□□□ 1.57
CASC1Q6TDU7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms