Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 AC026471.6-201ENST00000622954 1905 ntBASIC18.66■□□□□ 0.58
ZNF544Q6NX49 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF544Q6NX49 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF544Q6NX49 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF544Q6NX49 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.64■□□□□ 0.58
ZNF544Q6NX49 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF544Q6NX49 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF544Q6NX49 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 AP004607.7-201ENST00000527152 1677 ntBASIC18.63■□□□□ 0.57
ZNF544Q6NX49 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF544Q6NX49 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 AFG3L1P-217ENST00000557444 2447 ntBASIC18.62■□□□□ 0.57
ZNF544Q6NX49 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF544Q6NX49 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF544Q6NX49 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF544Q6NX49 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms