Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 AC021242.3-201ENST00000607598 1377 ntBASIC19.24■□□□□ 0.67
LPCAT4Q643R3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LPCAT4Q643R3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 AC005332.8-201ENST00000622750 2735 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 AC103724.3-201ENST00000564481 992 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 pRNA.6-201ENST00000610482 90 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 pRNA.5-201ENST00000612139 90 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 pRNA.11-201ENST00000618423 90 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 pRNA.13-201ENST00000619112 90 ntBASIC19.22■□□□□ 0.67
LPCAT4Q643R3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LPCAT4Q643R3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 AC103834.1-201ENST00000520383 144 ntBASIC19.21■□□□□ 0.67
LPCAT4Q643R3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
LPCAT4Q643R3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 AC120498.9-201ENST00000339021 3867 ntBASIC19.2■□□□□ 0.66
LPCAT4Q643R3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 AC006455.2-201ENST00000429931 906 ntBASIC19.2■□□□□ 0.66
LPCAT4Q643R3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 AL033527.3-201ENST00000566366 1196 ntBASIC19.2■□□□□ 0.66
LPCAT4Q643R3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LPCAT4Q643R3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LPCAT4Q643R3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms