Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.03□□□□□ -0.64
RNF213Q63HN8 PMS2P1-201ENST00000431037 1228 ntBASIC11.03□□□□□ -0.64
RNF213Q63HN8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.03□□□□□ -0.64
RNF213Q63HN8 AC243732.1-201ENST00000612648 864 ntBASIC11.03□□□□□ -0.64
RNF213Q63HN8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC11.03□□□□□ -0.64
RNF213Q63HN8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RNF213Q63HN8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 AC116562.2-201ENST00000507042 360 ntBASIC11.02□□□□□ -0.64
RNF213Q63HN8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.02□□□□□ -0.64
RNF213Q63HN8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.02□□□□□ -0.64
RNF213Q63HN8 AC069148.1-201ENST00000608741 768 ntBASIC11.02□□□□□ -0.64
RNF213Q63HN8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.02□□□□□ -0.64
RNF213Q63HN8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.02□□□□□ -0.64
RNF213Q63HN8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.02□□□□□ -0.64
RNF213Q63HN8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RNF213Q63HN8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 TSPY14P-201ENST00000303979 915 ntBASIC11.02□□□□□ -0.65
RNF213Q63HN8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RNF213Q63HN8 KRT16P5-201ENST00000455284 522 ntBASIC11.02□□□□□ -0.65
RNF213Q63HN8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
RNF213Q63HN8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AC092647.4-201ENST00000457211 535 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AC111152.3-201ENST00000569699 673 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 FAAHP1-202ENST00000446499 1238 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AL139424.1-201ENST00000607572 797 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 PMS2P2-201ENST00000425039 1128 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF213Q63HN8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 AL138966.2-201ENST00000621997 464 ntBASIC11.01□□□□□ -0.65
RNF213Q63HN8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RNF213Q63HN8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC11□□□□□ -0.65
RNF213Q63HN8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11□□□□□ -0.65
RNF213Q63HN8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC11□□□□□ -0.65
RNF213Q63HN8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11□□□□□ -0.65
RNF213Q63HN8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RNF213Q63HN8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC11□□□□□ -0.65
RNF213Q63HN8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF213Q63HN8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11□□□□□ -0.65
RNF213Q63HN8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC11□□□□□ -0.65
RNF213Q63HN8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms