Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 MKRN4P-201ENST00000444706 1521 ntBASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 NCF1B-203ENST00000435988 1254 ntBASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DQA1Q5Y7H0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA1Q5Y7H0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DQA1Q5Y7H0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DQA1Q5Y7H0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA1Q5Y7H0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA1Q5Y7H0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC006128.1-201ENST00000624704 1661 ntBASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 PLK5-205ENST00000642079 1969 ntBASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC100791.3-201ENST00000617619 330 ntBASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA1Q5Y7H0 CLDN5-201ENST00000403084 2357 ntBASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC093787.1-201ENST00000450396 207 ntBASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC010980.2-201ENST00000587099 1412 ntBASIC19■□□□□ 0.63
HLA-DQA1Q5Y7H0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 AL109923.1-201ENST00000618799 583 ntBASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC027702.1-201ENST00000563810 1770 ntBASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DQA1Q5Y7H0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms