Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 AC104076.2-201ENST00000448912 469 ntBASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
SNAPC4Q5SXM2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 AC087388.1-201ENST00000571370 1112 ntBASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC33.75■■■□□ 2.99
SNAPC4Q5SXM2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 AL137013.1-201ENST00000432946 1228 ntBASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 NAPSB-206ENST00000562112 1266 ntBASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC33.74■■■□□ 2.99
SNAPC4Q5SXM2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 PGM5P4-201ENST00000421970 445 ntBASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 NBPF21P-201ENST00000425093 1451 ntBASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNAPC4Q5SXM2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
SNAPC4Q5SXM2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
SNAPC4Q5SXM2 FITM1-202ENST00000559294 800 ntBASIC33.72■■■□□ 2.99
SNAPC4Q5SXM2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
SNAPC4Q5SXM2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
SNAPC4Q5SXM2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC33.71■■■□□ 2.99
SNAPC4Q5SXM2 KRT18P22-201ENST00000402024 1347 ntBASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 AC010203.1-204ENST00000548782 407 ntBASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 AL121894.2-201ENST00000602977 491 ntBASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SNAPC4Q5SXM2 AC124283.5-201ENST00000624661 1809 ntBASIC33.7■■■□□ 2.98
SNAPC4Q5SXM2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC33.7■■■□□ 2.98
SNAPC4Q5SXM2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC33.69■■■□□ 2.98
SNAPC4Q5SXM2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC33.68■■■□□ 2.98
SNAPC4Q5SXM2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
SNAPC4Q5SXM2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.66■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms