Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RUNDC3AQ59EK9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RUNDC3AQ59EK9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RUNDC3AQ59EK9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RUNDC3AQ59EK9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 AL358852.1-201ENST00000623174 1268 ntBASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 AC116050.2-201ENST00000612102 1779 ntBASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RUNDC3AQ59EK9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SUDS3P1-201ENST00000505831 966 ntBASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 SMG8-203ENST00000578922 2178 ntBASIC19.25■□□□□ 0.67
RUNDC3AQ59EK9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 AC120498.10-201ENST00000621827 505 ntBASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.24■□□□□ 0.67
RUNDC3AQ59EK9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 MIR6084-201ENST00000622012 110 ntBASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RUNDC3AQ59EK9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms