Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf46Q504U0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
C4orf46Q504U0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf46Q504U0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
C4orf46Q504U0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf46Q504U0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf46Q504U0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
C4orf46Q504U0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.28■□□□□ 0.36
C4orf46Q504U0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf46Q504U0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
C4orf46Q504U0 AC021242.3-201ENST00000607598 1377 ntBASIC17.28■□□□□ 0.36
C4orf46Q504U0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
C4orf46Q504U0 AC241377.3-202ENST00000626088 1088 ntBASIC17.27■□□□□ 0.36
C4orf46Q504U0 AC241585.3-202ENST00000628937 1088 ntBASIC17.27■□□□□ 0.36
C4orf46Q504U0 AC245100.8-202ENST00000629247 1058 ntBASIC17.27■□□□□ 0.36
C4orf46Q504U0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf46Q504U0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf46Q504U0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
C4orf46Q504U0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf46Q504U0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf46Q504U0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf46Q504U0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf46Q504U0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
C4orf46Q504U0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C4orf46Q504U0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf46Q504U0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms