Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM259Q4ZIN3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM259Q4ZIN3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM259Q4ZIN3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TMEM259Q4ZIN3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 CDV3P1-201ENST00000471403 739 ntBASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM259Q4ZIN3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TMEM259Q4ZIN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 TSPY20P-201ENST00000450910 630 ntBASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 MIR4651-201ENST00000582622 73 ntBASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM259Q4ZIN3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 AC083880.1-201ENST00000608266 535 ntBASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 AC100791.3-201ENST00000617619 330 ntBASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM259Q4ZIN3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 AC091874.3-201ENST00000512672 1195 ntBASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM259Q4ZIN3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 AL391422.3-201ENST00000603791 2761 ntBASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM259Q4ZIN3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 DUSP5P2-201ENST00000426873 1033 ntBASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM259Q4ZIN3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms