Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC004854.2-201ENST00000608450 1441 ntBASIC19.94■□□□□ 0.78
CDH13P55290 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDH13P55290 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDH13P55290 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH13P55290 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH13P55290 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH13P55290 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH13P55290 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH13P55290 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDH13P55290 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH13P55290 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDH13P55290 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.93■□□□□ 0.78
CDH13P55290 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH13P55290 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CDH13P55290 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH13P55290 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 KRT18P14-201ENST00000534205 1250 ntBASIC19.93■□□□□ 0.78
CDH13P55290 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.93■□□□□ 0.78
CDH13P55290 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH13P55290 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH13P55290 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH13P55290 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDH13P55290 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH13P55290 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH13P55290 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 ZNRF2P3-201ENST00000424200 374 ntBASIC19.92■□□□□ 0.78
CDH13P55290 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.92■□□□□ 0.78
CDH13P55290 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH13P55290 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 MIR2861-201ENST00000636310 90 ntBASIC19.92■□□□□ 0.78
CDH13P55290 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH13P55290 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH13P55290 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH13P55290 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDH13P55290 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH13P55290 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH13P55290 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH13P55290 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH13P55290 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH13P55290 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH13P55290 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 KRT18P20-201ENST00000548986 1279 ntBASIC19.9■□□□□ 0.78
CDH13P55290 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH13P55290 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH13P55290 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH13P55290 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDH13P55290 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH13P55290 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH13P55290 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CDH13P55290 SMG8-203ENST00000578922 2178 ntBASIC19.9■□□□□ 0.78
CDH13P55290 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms