Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SMSP52788 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SMSP52788 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SMSP52788 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SMSP52788 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.06■□□□□ 0.64
SMSP52788 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SMSP52788 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.06■□□□□ 0.64
SMSP52788 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.06■□□□□ 0.64
SMSP52788 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.06■□□□□ 0.64
SMSP52788 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMSP52788 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SMSP52788 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SMSP52788 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.05■□□□□ 0.64
SMSP52788 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMSP52788 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.05■□□□□ 0.64
SMSP52788 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SMSP52788 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.04■□□□□ 0.64
SMSP52788 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.04■□□□□ 0.64
SMSP52788 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SMSP52788 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.04■□□□□ 0.64
SMSP52788 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMSP52788 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.04■□□□□ 0.64
SMSP52788 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SMSP52788 AC010536.3-201ENST00000620306 533 ntBASIC19.04■□□□□ 0.64
SMSP52788 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
SMSP52788 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMSP52788 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.04■□□□□ 0.64
SMSP52788 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMSP52788 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMSP52788 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMSP52788 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.03■□□□□ 0.64
SMSP52788 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.03■□□□□ 0.64
SMSP52788 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 AP005212.1-201ENST00000581547 1997 ntBASIC19.03■□□□□ 0.64
SMSP52788 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMSP52788 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.03■□□□□ 0.64
SMSP52788 MIR4758-201ENST00000577688 71 ntBASIC19.03■□□□□ 0.64
SMSP52788 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.03■□□□□ 0.64
SMSP52788 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.03■□□□□ 0.64
SMSP52788 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.03■□□□□ 0.64
SMSP52788 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMSP52788 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMSP52788 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.02■□□□□ 0.64
SMSP52788 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
SMSP52788 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.02■□□□□ 0.64
SMSP52788 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMSP52788 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SMSP52788 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMSP52788 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.02■□□□□ 0.64
SMSP52788 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMSP52788 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.02■□□□□ 0.64
SMSP52788 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SMSP52788 AC010141.2-201ENST00000452426 721 ntBASIC19.02■□□□□ 0.64
SMSP52788 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMSP52788 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.02■□□□□ 0.64
SMSP52788 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.02■□□□□ 0.64
SMSP52788 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.02■□□□□ 0.64
SMSP52788 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms