Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
PCP4P48539 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PCP4P48539 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PCP4P48539 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
PCP4P48539 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.19□□□□□ -0.14
PCP4P48539 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.19□□□□□ -0.14
PCP4P48539 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.19□□□□□ -0.14
PCP4P48539 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCP4P48539 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.18□□□□□ -0.14
PCP4P48539 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PCP4P48539 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.18□□□□□ -0.14
PCP4P48539 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.18□□□□□ -0.14
PCP4P48539 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 HLA-L-211ENST00000482052 1765 ntBASIC14.18□□□□□ -0.14
PCP4P48539 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCP4P48539 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.18□□□□□ -0.14
PCP4P48539 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCP4P48539 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCP4P48539 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 HYMAI-201ENST00000635591 3347 ntBASIC14.17□□□□□ -0.14
PCP4P48539 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PCP4P48539 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
PCP4P48539 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCP4P48539 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.17□□□□□ -0.14
PCP4P48539 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
PCP4P48539 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCP4P48539 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCP4P48539 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PCP4P48539 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PCP4P48539 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.16□□□□□ -0.14
PCP4P48539 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCP4P48539 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.16□□□□□ -0.14
PCP4P48539 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
PCP4P48539 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCP4P48539 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms