Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 YBP2YGL060W 1926 nt1.03□□□□□ -2.25
LSM1P47017 YDR537CYDR537C 606 nt1.02□□□□□ -2.25
LSM1P47017 YIP1YGR172C 747 nt1.02□□□□□ -2.25
LSM1P47017 YGR250CYGR250C 2346 nt1.02□□□□□ -2.25
LSM1P47017 UFD2YDL190C 2886 nt1.02□□□□□ -2.25
LSM1P47017 SNF12YNR023W 1701 nt1.01□□□□□ -2.25
LSM1P47017 TRM732YMR259C 4263 nt1.01□□□□□ -2.25
LSM1P47017 SAY1YGR263C 1275 nt1.01□□□□□ -2.25
LSM1P47017 GOS1YHL031C 672 nt1.01□□□□□ -2.25
LSM1P47017 GIC1YHR061C 945 nt1.01□□□□□ -2.25
LSM1P47017 SDL1YIL167W 633 nt1.01□□□□□ -2.25
LSM1P47017 CCE1YKL011C 1062 nt1.01□□□□□ -2.25
LSM1P47017 YLR042CYLR042C 486 nt1.01□□□□□ -2.25
LSM1P47017 DAS1YJL149W 1992 nt1.01□□□□□ -2.25
LSM1P47017 YCR102W-AYCR102W-A 198 nt1□□□□□ -2.25
LSM1P47017 YDR336WYDR336W 945 nt1□□□□□ -2.25
LSM1P47017 CAJ1YER048C 1176 nt1□□□□□ -2.25
LSM1P47017 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
LSM1P47017 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
LSM1P47017 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
LSM1P47017 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
LSM1P47017 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
LSM1P47017 VPS25YJR102C 609 nt1□□□□□ -2.25
LSM1P47017 NSL1YPL233W 651 nt1□□□□□ -2.25
LSM1P47017 YNL284C-BYNL284C-B 5268 nt1□□□□□ -2.25
LSM1P47017 DGR2YKL121W 2559 nt1□□□□□ -2.25
LSM1P47017 RPL40AYIL148W 387 nt0.99□□□□□ -2.25
LSM1P47017 TAP42YMR028W 1101 nt0.99□□□□□ -2.25
LSM1P47017 YOL159C-AYOL159C-A 273 nt0.99□□□□□ -2.25
LSM1P47017 KIP1YBL063W 3336 nt0.99□□□□□ -2.25
LSM1P47017 NCS2YNL119W 1482 nt0.99□□□□□ -2.25
LSM1P47017 MUK1YPL070W 1839 nt0.99□□□□□ -2.25
LSM1P47017 CTF13YMR094W 1437 nt0.98□□□□□ -2.25
LSM1P47017 SNF5YBR289W 2718 nt0.98□□□□□ -2.25
LSM1P47017 YDR210W-AYDR210W-A 1317 nt0.98□□□□□ -2.25
LSM1P47017 YOR343W-AYOR343W-A 1317 nt0.98□□□□□ -2.25
LSM1P47017 BEM2YER155C 6504 nt0.98□□□□□ -2.25
LSM1P47017 YGL258W-AYGL258W-A 234 nt0.98□□□□□ -2.25
LSM1P47017 PRS3YHL011C 963 nt0.98□□□□□ -2.25
LSM1P47017 SEC28YIL076W 891 nt0.98□□□□□ -2.25
LSM1P47017 YNL114CYNL114C 372 nt0.98□□□□□ -2.25
LSM1P47017 YNL226WYNL226W 411 nt0.98□□□□□ -2.25
LSM1P47017 TRS20YBR254C 528 nt0.98□□□□□ -2.25
LSM1P47017 MVP1YMR004W 1536 nt0.98□□□□□ -2.25
LSM1P47017 MAM1YER106W 909 nt0.97□□□□□ -2.25
LSM1P47017 VOA1YGR106C 798 nt0.97□□□□□ -2.25
LSM1P47017 YHL048C-AYHL048C-A 135 nt0.97□□□□□ -2.25
LSM1P47017 DOT6YER088C 2013 nt0.97□□□□□ -2.25
LSM1P47017 MSS11YMR164C 2277 nt0.97□□□□□ -2.25
LSM1P47017 SEF1YBL066C 3447 nt0.97□□□□□ -2.25
LSM1P47017 IML1YJR138W 4755 nt0.97□□□□□ -2.25
LSM1P47017 MSC6YOR354C 2079 nt0.96□□□□□ -2.25
LSM1P47017 YHR052W-AYHR052W-A 195 nt0.96□□□□□ -2.26
LSM1P47017 YHR054W-AYHR054W-A 195 nt0.96□□□□□ -2.26
LSM1P47017 YNR021WYNR021W 1215 nt0.96□□□□□ -2.26
LSM1P47017 RIC1YLR039C 3171 nt0.96□□□□□ -2.26
LSM1P47017 YER088C-AYER088C-A 324 nt0.95□□□□□ -2.26
LSM1P47017 YJR071WYJR071W 369 nt0.95□□□□□ -2.26
LSM1P47017 SPC24YMR117C 642 nt0.95□□□□□ -2.26
LSM1P47017 VID24YBR105C 1089 nt0.95□□□□□ -2.26
LSM1P47017 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
LSM1P47017 YHL037CYHL037C 402 nt0.94□□□□□ -2.26
LSM1P47017 COX6YHR051W 447 nt0.94□□□□□ -2.26
LSM1P47017 HYR1YIR037W 492 nt0.94□□□□□ -2.26
LSM1P47017 TIF11YMR260C 462 nt0.94□□□□□ -2.26
LSM1P47017 YNL171CYNL171C 369 nt0.94□□□□□ -2.26
LSM1P47017 SWM2YNR004W 441 nt0.94□□□□□ -2.26
LSM1P47017 RPB11YOL005C 363 nt0.94□□□□□ -2.26
LSM1P47017 SHG1YBR258C 429 nt0.94□□□□□ -2.26
LSM1P47017 SIP4YJL089W 2490 nt0.94□□□□□ -2.26
LSM1P47017 SLK19YOR195W 2466 nt0.94□□□□□ -2.26
LSM1P47017 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
LSM1P47017 SMY1YKL079W 1971 nt0.94□□□□□ -2.26
LSM1P47017 RLM1YPL089C 2031 nt0.93□□□□□ -2.26
LSM1P47017 SLD5YDR489W 885 nt0.93□□□□□ -2.26
LSM1P47017 tV(UAC)BtV(UAC)B 74 nt0.93□□□□□ -2.26
LSM1P47017 tV(UAC)DtV(UAC)D 74 nt0.93□□□□□ -2.26
LSM1P47017 YKL115CYKL115C 393 nt0.93□□□□□ -2.26
LSM1P47017 NEJ1YLR265C 1029 nt0.93□□□□□ -2.26
LSM1P47017 YOL085W-AYOL085W-A 213 nt0.93□□□□□ -2.26
LSM1P47017 SPE1YKL184W 1401 nt0.92□□□□□ -2.26
LSM1P47017 YLR422WYLR422W 5799 nt0.92□□□□□ -2.26
LSM1P47017 YCR024C-BYCR024C-B 267 nt0.92□□□□□ -2.26
LSM1P47017 SPC1YJR010C-A 285 nt0.92□□□□□ -2.26
LSM1P47017 YOR376WYOR376W 369 nt0.92□□□□□ -2.26
LSM1P47017 CUR1YPR158W 759 nt0.92□□□□□ -2.26
LSM1P47017 CDC27YBL084C 2277 nt0.92□□□□□ -2.26
LSM1P47017 SEC3YER008C 4011 nt0.92□□□□□ -2.26
LSM1P47017 NUP188YML103C 4968 nt0.92□□□□□ -2.26
LSM1P47017 VPS54YDR027C 2670 nt0.92□□□□□ -2.26
LSM1P47017 RPN9YDR427W 1182 nt0.91□□□□□ -2.26
LSM1P47017 MEI4YER044C-A 1227 nt0.91□□□□□ -2.26
LSM1P47017 YLR458WYLR458W 381 nt0.91□□□□□ -2.26
LSM1P47017 RPS18BYML026C 441 nt0.91□□□□□ -2.26
LSM1P47017 PGA1YNL158W 597 nt0.91□□□□□ -2.26
LSM1P47017 ICS2YBR157C 768 nt0.91□□□□□ -2.26
LSM1P47017 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
LSM1P47017 YJR029WYJR029W 5268 nt0.91□□□□□ -2.26
LSM1P47017 YPR137C-BYPR137C-B 5268 nt0.91□□□□□ -2.26
LSM1P47017 SCC2YDR180W 4482 nt0.9□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms