Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 RPS21AYKR057W 264 nt3.38□□□□□ -1.87
RPN3P40016 YLR012CYLR012C 300 nt3.38□□□□□ -1.87
RPN3P40016 snR49snR49 165 nt3.38□□□□□ -1.87
RPN3P40016 SIP3YNL257C 3690 nt3.38□□□□□ -1.87
RPN3P40016 TFB1YDR311W 1929 nt3.38□□□□□ -1.87
RPN3P40016 NPR1YNL183C 2373 nt3.38□□□□□ -1.87
RPN3P40016 SPO14YKR031C 5052 nt3.37□□□□□ -1.87
RPN3P40016 HFM1YGL251C 3564 nt3.37□□□□□ -1.87
RPN3P40016 ARP7YPR034W 1434 nt3.37□□□□□ -1.87
RPN3P40016 TOM70YNL121C 1854 nt3.37□□□□□ -1.87
RPN3P40016 ALG13YGL047W 609 nt3.37□□□□□ -1.87
RPN3P40016 SPT4YGR063C 309 nt3.37□□□□□ -1.87
RPN3P40016 YHR214C-EYHR214C-E 300 nt3.37□□□□□ -1.87
RPN3P40016 LSM1YJL124C 519 nt3.37□□□□□ -1.87
RPN3P40016 PFD1YJL179W 330 nt3.37□□□□□ -1.87
RPN3P40016 SDH2YLL041C 801 nt3.37□□□□□ -1.87
RPN3P40016 YCL023CYCL023C 348 nt3.37□□□□□ -1.87
RPN3P40016 LEU3YLR451W 2661 nt3.37□□□□□ -1.87
RPN3P40016 YJL181WYJL181W 1836 nt3.36□□□□□ -1.87
RPN3P40016 HTL1YCR020W-B 237 nt3.36□□□□□ -1.87
RPN3P40016 snR79snR79 84 nt3.36□□□□□ -1.87
RPN3P40016 YDR048CYDR048C 315 nt3.36□□□□□ -1.87
RPN3P40016 PAM16YJL104W 450 nt3.36□□□□□ -1.87
RPN3P40016 YJL182CYJL182C 318 nt3.36□□□□□ -1.87
RPN3P40016 YKR033CYKR033C 426 nt3.36□□□□□ -1.87
RPN3P40016 YLR466C-BYLR466C-B 117 nt3.36□□□□□ -1.87
RPN3P40016 DAD3YBR233W-A 285 nt3.36□□□□□ -1.87
RPN3P40016 EPL1YFL024C 2499 nt3.36□□□□□ -1.87
RPN3P40016 FLO5YHR211W 3228 nt3.36□□□□□ -1.87
RPN3P40016 CHO2YGR157W 2610 nt3.36□□□□□ -1.87
RPN3P40016 RGC1YPR115W 3252 nt3.36□□□□□ -1.87
RPN3P40016 GYP7YDL234C 2241 nt3.35□□□□□ -1.87
RPN3P40016 YEL020C-BYEL020C-B 198 nt3.35□□□□□ -1.87
RPN3P40016 tQ(UUG)BtQ(UUG)B 72 nt3.35□□□□□ -1.87
RPN3P40016 APQ12YIL040W 417 nt3.35□□□□□ -1.87
RPN3P40016 YJL020W-AYJL020W-A 258 nt3.35□□□□□ -1.87
RPN3P40016 YBL008W-AYBL008W-A 240 nt3.35□□□□□ -1.87
RPN3P40016 SIN3YOL004W 4611 nt3.35□□□□□ -1.87
RPN3P40016 YLR352WYLR352W 2424 nt3.34□□□□□ -1.87
RPN3P40016 SOD1YJR104C 465 nt3.34□□□□□ -1.87
RPN3P40016 HSK3YKL138C-A 210 nt3.34□□□□□ -1.87
RPN3P40016 RPS18BYML026C 441 nt3.34□□□□□ -1.87
RPN3P40016 PEX1YKL197C 3132 nt3.34□□□□□ -1.88
RPN3P40016 CDC24YAL041W 2565 nt3.34□□□□□ -1.88
RPN3P40016 MCD1YDL003W 1701 nt3.33□□□□□ -1.88
RPN3P40016 ETP1YHL010C 1758 nt3.33□□□□□ -1.88
RPN3P40016 RPS17BYDR447C 411 nt3.33□□□□□ -1.88
RPN3P40016 YPL182CYPL182C 384 nt3.33□□□□□ -1.88
RPN3P40016 YPR146CYPR146C 330 nt3.33□□□□□ -1.88
RPN3P40016 DBP6YNR038W 1890 nt3.33□□□□□ -1.88
RPN3P40016 RAD61YDR014W 1944 nt3.32□□□□□ -1.88
RPN3P40016 HCS1YKL017C 2052 nt3.32□□□□□ -1.88
RPN3P40016 SNT1YCR033W 3681 nt3.32□□□□□ -1.88
RPN3P40016 BRO1YPL084W 2535 nt3.32□□□□□ -1.88
RPN3P40016 MSH2YOL090W 2895 nt3.32□□□□□ -1.88
RPN3P40016 YGR151CYGR151C 336 nt3.32□□□□□ -1.88
RPN3P40016 CCW14YLR390W-A 717 nt3.32□□□□□ -1.88
RPN3P40016 RPL32YBL092W 393 nt3.32□□□□□ -1.88
RPN3P40016 YOL155W-AYOL155W-A 135 nt3.32□□□□□ -1.88
RPN3P40016 IES4YOR189W 351 nt3.32□□□□□ -1.88
RPN3P40016 MF(ALPHA)1YPL187W 498 nt3.32□□□□□ -1.88
RPN3P40016 AIM9YER080W 1884 nt3.32□□□□□ -1.88
RPN3P40016 MTR4YJL050W 3222 nt3.32□□□□□ -1.88
RPN3P40016 POL3YDL102W 3294 nt3.32□□□□□ -1.88
RPN3P40016 SYT1YPR095C 3681 nt3.32□□□□□ -1.88
RPN3P40016 YSP2YDR326C 4317 nt3.32□□□□□ -1.88
RPN3P40016 YDR034C-DYDR034C-D 5313 nt3.31□□□□□ -1.88
RPN3P40016 FLO9YAL063C 3969 nt3.31□□□□□ -1.88
RPN3P40016 APC11YDL008W 498 nt3.31□□□□□ -1.88
RPN3P40016 YFH1YDL120W 525 nt3.31□□□□□ -1.88
RPN3P40016 HTB2YBL002W 396 nt3.31□□□□□ -1.88
RPN3P40016 ZDS2YML109W 2829 nt3.31□□□□□ -1.88
RPN3P40016 COG3YER157W 2406 nt3.31□□□□□ -1.88
RPN3P40016 KAP95YLR347C 2586 nt3.3□□□□□ -1.88
RPN3P40016 REG1YDR028C 3045 nt3.3□□□□□ -1.88
RPN3P40016 MBB1YJL199C 327 nt3.3□□□□□ -1.88
RPN3P40016 YAL059C-AYAL059C-A 423 nt3.3□□□□□ -1.88
RPN3P40016 COA4YLR218C 453 nt3.3□□□□□ -1.88
RPN3P40016 RPL36BYPL249C-A 303 nt3.3□□□□□ -1.88
RPN3P40016 SKT5YBL061C 2091 nt3.3□□□□□ -1.88
RPN3P40016 PRP22YER013W 3438 nt3.3□□□□□ -1.88
RPN3P40016 POL2YNL262W 6669 nt3.3□□□□□ -1.88
RPN3P40016 PHO81YGR233C 3537 nt3.3□□□□□ -1.88
RPN3P40016 YFL065CYFL065C 309 nt3.29□□□□□ -1.88
RPN3P40016 VPS64YDR200C 1815 nt3.28□□□□□ -1.88
RPN3P40016 YME2YMR302C 2553 nt3.28□□□□□ -1.88
RPN3P40016 ATP8Q0080 147 nt3.28□□□□□ -1.88
RPN3P40016 YIL102CYIL102C 306 nt3.28□□□□□ -1.88
RPN3P40016 RPA34YJL148W 702 nt3.28□□□□□ -1.88
RPN3P40016 YBR064WYBR064W 429 nt3.28□□□□□ -1.88
RPN3P40016 ENA2YDR039C 3276 nt3.28□□□□□ -1.88
RPN3P40016 ENA1YDR040C 3276 nt3.28□□□□□ -1.88
RPN3P40016 FLO1YAR050W 4614 nt3.28□□□□□ -1.88
RPN3P40016 SSE1YPL106C 2082 nt3.28□□□□□ -1.89
RPN3P40016 TIM13YGR181W 318 nt3.27□□□□□ -1.89
RPN3P40016 YOR011W-AYOR011W-A 207 nt3.27□□□□□ -1.89
RPN3P40016 FUS1YCL027W 1539 nt3.27□□□□□ -1.89
RPN3P40016 ROG1YGL144C 2058 nt3.27□□□□□ -1.89
RPN3P40016 TCP1YDR212W 1680 nt3.27□□□□□ -1.89
RPN3P40016 DOA4YDR069C 2781 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms