Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHKAP35790 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHKAP35790 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CHKAP35790 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHKAP35790 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHKAP35790 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHKAP35790 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHKAP35790 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.52■■□□□ 1.04
CHKAP35790 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
CHKAP35790 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHKAP35790 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CHKAP35790 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHKAP35790 AC073314.1-201ENST00000568729 2216 ntBASIC21.52■■□□□ 1.04
CHKAP35790 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHKAP35790 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
CHKAP35790 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
CHKAP35790 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.51■■□□□ 1.03
CHKAP35790 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.51■■□□□ 1.03
CHKAP35790 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CHKAP35790 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.51■■□□□ 1.03
CHKAP35790 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 AC073210.2-201ENST00000430369 194 ntBASIC21.51■■□□□ 1.03
CHKAP35790 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.51■■□□□ 1.03
CHKAP35790 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.51■■□□□ 1.03
CHKAP35790 AC133041.1-202ENST00000642053 222 ntBASIC21.51■■□□□ 1.03
CHKAP35790 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.51■■□□□ 1.03
CHKAP35790 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHKAP35790 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 AC006128.1-201ENST00000624704 1661 ntBASIC21.5■■□□□ 1.03
CHKAP35790 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 AC091799.1-201ENST00000422823 811 ntBASIC21.5■■□□□ 1.03
CHKAP35790 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.5■■□□□ 1.03
CHKAP35790 RARRES2P4-201ENST00000514074 484 ntBASIC21.5■■□□□ 1.03
CHKAP35790 AL138781.1-201ENST00000566567 1274 ntBASIC21.5■■□□□ 1.03
CHKAP35790 MIR4758-201ENST00000577688 71 ntBASIC21.5■■□□□ 1.03
CHKAP35790 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.5■■□□□ 1.03
CHKAP35790 AC016405.3-201ENST00000607710 860 ntBASIC21.5■■□□□ 1.03
CHKAP35790 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.5■■□□□ 1.03
CHKAP35790 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.5■■□□□ 1.03
CHKAP35790 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.5■■□□□ 1.03
CHKAP35790 AP005212.1-201ENST00000581547 1997 ntBASIC21.5■■□□□ 1.03
CHKAP35790 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CHKAP35790 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHKAP35790 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHKAP35790 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.49■■□□□ 1.03
CHKAP35790 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.49■■□□□ 1.03
CHKAP35790 CDV3P1-201ENST00000471403 739 ntBASIC21.49■■□□□ 1.03
CHKAP35790 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.49■■□□□ 1.03
CHKAP35790 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHKAP35790 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHKAP35790 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.49■■□□□ 1.03
CHKAP35790 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 AC069152.1-201ENST00000438030 544 ntBASIC21.48■■□□□ 1.03
CHKAP35790 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.48■■□□□ 1.03
CHKAP35790 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.48■■□□□ 1.03
CHKAP35790 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CHKAP35790 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.48■■□□□ 1.03
CHKAP35790 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.48■■□□□ 1.03
CHKAP35790 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.48■■□□□ 1.03
CHKAP35790 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHKAP35790 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CHKAP35790 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms