Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 BX005040.4-201ENST00000637145 1518 ntBASIC20.48■□□□□ 0.87
LSP1P33241 AC021242.3-201ENST00000607598 1377 ntBASIC20.48■□□□□ 0.87
LSP1P33241 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
LSP1P33241 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
LSP1P33241 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.48■□□□□ 0.87
LSP1P33241 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.48■□□□□ 0.87
LSP1P33241 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.48■□□□□ 0.87
LSP1P33241 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.48■□□□□ 0.87
LSP1P33241 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.48■□□□□ 0.87
LSP1P33241 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSP1P33241 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LSP1P33241 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.47■□□□□ 0.87
LSP1P33241 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.47■□□□□ 0.87
LSP1P33241 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LSP1P33241 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
LSP1P33241 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.47■□□□□ 0.87
LSP1P33241 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.47■□□□□ 0.87
LSP1P33241 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.47■□□□□ 0.87
LSP1P33241 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
LSP1P33241 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LSP1P33241 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSP1P33241 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LSP1P33241 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSP1P33241 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSP1P33241 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSP1P33241 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.46■□□□□ 0.87
LSP1P33241 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.46■□□□□ 0.87
LSP1P33241 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
LSP1P33241 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSP1P33241 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSP1P33241 pRNA.6-201ENST00000610482 90 ntBASIC20.46■□□□□ 0.87
LSP1P33241 pRNA.5-201ENST00000612139 90 ntBASIC20.46■□□□□ 0.87
LSP1P33241 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.46■□□□□ 0.87
LSP1P33241 pRNA.11-201ENST00000618423 90 ntBASIC20.46■□□□□ 0.87
LSP1P33241 pRNA.13-201ENST00000619112 90 ntBASIC20.46■□□□□ 0.87
LSP1P33241 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LSP1P33241 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LSP1P33241 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.46■□□□□ 0.87
LSP1P33241 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LSP1P33241 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LSP1P33241 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LSP1P33241 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 OR2I1P-207ENST00000453522 948 ntBASIC20.45■□□□□ 0.86
LSP1P33241 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.45■□□□□ 0.86
LSP1P33241 AC241377.3-202ENST00000626088 1088 ntBASIC20.45■□□□□ 0.86
LSP1P33241 AC241585.3-202ENST00000628937 1088 ntBASIC20.45■□□□□ 0.86
LSP1P33241 AC245100.8-202ENST00000629247 1058 ntBASIC20.45■□□□□ 0.86
LSP1P33241 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
LSP1P33241 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
LSP1P33241 Z82202.1-201ENST00000623446 1880 ntBASIC20.45■□□□□ 0.86
LSP1P33241 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSP1P33241 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
LSP1P33241 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.44■□□□□ 0.86
LSP1P33241 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.44■□□□□ 0.86
LSP1P33241 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.44■□□□□ 0.86
LSP1P33241 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.44■□□□□ 0.86
LSP1P33241 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LSP1P33241 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.44■□□□□ 0.86
LSP1P33241 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSP1P33241 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms