Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.59■□□□□ 0.89
XPAP23025 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.59■□□□□ 0.89
XPAP23025 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.59■□□□□ 0.89
XPAP23025 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.59■□□□□ 0.89
XPAP23025 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.59■□□□□ 0.89
XPAP23025 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
XPAP23025 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.59■□□□□ 0.89
XPAP23025 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
XPAP23025 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.59■□□□□ 0.89
XPAP23025 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.58■□□□□ 0.89
XPAP23025 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
XPAP23025 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.58■□□□□ 0.89
XPAP23025 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
XPAP23025 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
XPAP23025 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 AC091874.3-201ENST00000512672 1195 ntBASIC20.58■□□□□ 0.89
XPAP23025 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
XPAP23025 CD99P1-205ENST00000527459 561 ntBASIC20.58■□□□□ 0.89
XPAP23025 KRT18P6-201ENST00000555540 1265 ntBASIC20.58■□□□□ 0.89
XPAP23025 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.58■□□□□ 0.89
XPAP23025 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.58■□□□□ 0.89
XPAP23025 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
XPAP23025 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.58■□□□□ 0.89
XPAP23025 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
XPAP23025 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
XPAP23025 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
XPAP23025 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
XPAP23025 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
XPAP23025 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
XPAP23025 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.57■□□□□ 0.88
XPAP23025 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
XPAP23025 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
XPAP23025 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.57■□□□□ 0.88
XPAP23025 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.57■□□□□ 0.88
XPAP23025 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
XPAP23025 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.57■□□□□ 0.88
XPAP23025 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
XPAP23025 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
XPAP23025 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
XPAP23025 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
XPAP23025 AF106564.1-201ENST00000607058 2553 ntBASIC20.56■□□□□ 0.88
XPAP23025 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 AC087633.2-202ENST00000565166 1439 ntBASIC20.56■□□□□ 0.88
XPAP23025 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
XPAP23025 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.56■□□□□ 0.88
XPAP23025 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.56■□□□□ 0.88
XPAP23025 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.56■□□□□ 0.88
XPAP23025 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
XPAP23025 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.56■□□□□ 0.88
XPAP23025 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
XPAP23025 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.55■□□□□ 0.88
XPAP23025 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.55■□□□□ 0.88
XPAP23025 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.55■□□□□ 0.88
XPAP23025 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 AC105020.6-201ENST00000621523 1217 ntBASIC20.55■□□□□ 0.88
XPAP23025 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
XPAP23025 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.54■□□□□ 0.88
XPAP23025 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.54■□□□□ 0.88
XPAP23025 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms