Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 AC092437.1-201ENST00000624794 1048 ntBASIC20.78■□□□□ 0.92
NFKB1P19838 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NFKB1P19838 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKB1P19838 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NFKB1P19838 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NFKB1P19838 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.77■□□□□ 0.92
NFKB1P19838 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKB1P19838 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NFKB1P19838 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NFKB1P19838 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.77■□□□□ 0.92
NFKB1P19838 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.77■□□□□ 0.92
NFKB1P19838 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB1P19838 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NFKB1P19838 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKB1P19838 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.76■□□□□ 0.91
NFKB1P19838 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKB1P19838 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB1P19838 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB1P19838 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB1P19838 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 AC068338.2-201ENST00000563278 1430 ntBASIC20.76■□□□□ 0.91
NFKB1P19838 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 AC092720.2-201ENST00000602388 1665 ntBASIC20.76■□□□□ 0.91
NFKB1P19838 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB1P19838 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB1P19838 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB1P19838 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NFKB1P19838 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.75■□□□□ 0.91
NFKB1P19838 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 AL162412.1-201ENST00000567129 965 ntBASIC20.75■□□□□ 0.91
NFKB1P19838 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NFKB1P19838 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.75■□□□□ 0.91
NFKB1P19838 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB1P19838 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NFKB1P19838 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB1P19838 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB1P19838 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
NFKB1P19838 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.74■□□□□ 0.91
NFKB1P19838 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB1P19838 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB1P19838 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB1P19838 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.74■□□□□ 0.91
NFKB1P19838 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NFKB1P19838 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB1P19838 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.73■□□□□ 0.91
NFKB1P19838 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NFKB1P19838 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 KRT8P36-201ENST00000489121 1440 ntBASIC20.73■□□□□ 0.91
NFKB1P19838 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.73■□□□□ 0.91
NFKB1P19838 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.73■□□□□ 0.91
NFKB1P19838 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.73■□□□□ 0.91
NFKB1P19838 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.73■□□□□ 0.91
NFKB1P19838 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NFKB1P19838 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.73■□□□□ 0.91
NFKB1P19838 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NFKB1P19838 AL512408.1-201ENST00000569378 2000 ntBASIC20.73■□□□□ 0.91
NFKB1P19838 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms