Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDE6GP18545 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDE6GP18545 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6GP18545 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6GP18545 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6GP18545 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6GP18545 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6GP18545 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6GP18545 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
PDE6GP18545 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6GP18545 AC005332.7-201ENST00000614046 2005 ntBASIC12.66□□□□□ -0.38
PDE6GP18545 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6GP18545 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 AC133552.2-201ENST00000619106 1032 ntBASIC12.66□□□□□ -0.38
PDE6GP18545 AC022413.1-201ENST00000624602 984 ntBASIC12.66□□□□□ -0.38
PDE6GP18545 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6GP18545 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PDE6GP18545 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
PDE6GP18545 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6GP18545 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6GP18545 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 AF131216.4-201ENST00000638924 1588 ntBASIC12.65□□□□□ -0.38
PDE6GP18545 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6GP18545 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PDE6GP18545 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
PDE6GP18545 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6GP18545 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6GP18545 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PDE6GP18545 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.65□□□□□ -0.39
PDE6GP18545 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
PDE6GP18545 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
PDE6GP18545 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.39
PDE6GP18545 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.64□□□□□ -0.39
PDE6GP18545 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6GP18545 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
PDE6GP18545 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6GP18545 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PDE6GP18545 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms