Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBL4AP11441 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
UBL4AP11441 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBL4AP11441 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
UBL4AP11441 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBL4AP11441 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBL4AP11441 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.83■□□□□ 0.6
UBL4AP11441 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UBL4AP11441 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.83■□□□□ 0.6
UBL4AP11441 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 BID-214ENST00000617586 542 ntTSL 5 BASIC18.83■□□□□ 0.6
UBL4AP11441 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBL4AP11441 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UBL4AP11441 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.83■□□□□ 0.6
UBL4AP11441 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 AC007225.1-201ENST00000566331 1836 ntBASIC18.83■□□□□ 0.6
UBL4AP11441 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
UBL4AP11441 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBL4AP11441 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBL4AP11441 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
UBL4AP11441 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UBL4AP11441 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.82■□□□□ 0.6
UBL4AP11441 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.82■□□□□ 0.6
UBL4AP11441 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UBL4AP11441 AC011767.1-201ENST00000617410 1153 ntBASIC18.82■□□□□ 0.6
UBL4AP11441 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.82■□□□□ 0.6
UBL4AP11441 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBL4AP11441 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.82■□□□□ 0.6
UBL4AP11441 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBL4AP11441 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
UBL4AP11441 FP700111.2-201ENST00000619190 1892 ntBASIC18.82■□□□□ 0.6
UBL4AP11441 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.81■□□□□ 0.6
UBL4AP11441 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
UBL4AP11441 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
UBL4AP11441 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.81■□□□□ 0.6
UBL4AP11441 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.81■□□□□ 0.6
UBL4AP11441 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.81■□□□□ 0.6
UBL4AP11441 AC007322.4-201ENST00000509611 723 ntBASIC18.81■□□□□ 0.6
UBL4AP11441 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.81■□□□□ 0.6
UBL4AP11441 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.81■□□□□ 0.6
UBL4AP11441 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.81■□□□□ 0.6
UBL4AP11441 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBL4AP11441 AL591742.1-201ENST00000604433 565 ntBASIC18.81■□□□□ 0.6
UBL4AP11441 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.81■□□□□ 0.6
UBL4AP11441 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.81■□□□□ 0.6
UBL4AP11441 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
UBL4AP11441 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBL4AP11441 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.8■□□□□ 0.6
UBL4AP11441 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.8■□□□□ 0.6
UBL4AP11441 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.8■□□□□ 0.6
UBL4AP11441 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.8■□□□□ 0.6
UBL4AP11441 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.8■□□□□ 0.6
UBL4AP11441 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.8■□□□□ 0.6
UBL4AP11441 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBL4AP11441 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.8■□□□□ 0.6
UBL4AP11441 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.8■□□□□ 0.6
UBL4AP11441 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBL4AP11441 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
UBL4AP11441 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL4AP11441 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UBL4AP11441 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms