Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.44■□□□□ 0.86
APOA4P06727 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
APOA4P06727 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.44■□□□□ 0.86
APOA4P06727 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APOA4P06727 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
APOA4P06727 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.44■□□□□ 0.86
APOA4P06727 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.44■□□□□ 0.86
APOA4P06727 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
APOA4P06727 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOA4P06727 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.43■□□□□ 0.86
APOA4P06727 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 FP700111.2-201ENST00000619190 1892 ntBASIC20.43■□□□□ 0.86
APOA4P06727 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
APOA4P06727 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
APOA4P06727 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.43■□□□□ 0.86
APOA4P06727 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.43■□□□□ 0.86
APOA4P06727 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.43■□□□□ 0.86
APOA4P06727 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
APOA4P06727 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOA4P06727 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
APOA4P06727 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
APOA4P06727 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.42■□□□□ 0.86
APOA4P06727 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.42■□□□□ 0.86
APOA4P06727 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.42■□□□□ 0.86
APOA4P06727 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.42■□□□□ 0.86
APOA4P06727 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOA4P06727 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
APOA4P06727 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.41■□□□□ 0.86
APOA4P06727 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.41■□□□□ 0.86
APOA4P06727 AC022517.1-201ENST00000592429 346 ntBASIC20.41■□□□□ 0.86
APOA4P06727 RARRES2P11-201ENST00000635158 484 ntBASIC20.41■□□□□ 0.86
APOA4P06727 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOA4P06727 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APOA4P06727 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
APOA4P06727 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
APOA4P06727 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
APOA4P06727 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
APOA4P06727 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.4■□□□□ 0.86
APOA4P06727 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.4■□□□□ 0.86
APOA4P06727 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
APOA4P06727 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.4■□□□□ 0.86
APOA4P06727 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.4■□□□□ 0.86
APOA4P06727 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.4■□□□□ 0.86
APOA4P06727 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.4■□□□□ 0.86
APOA4P06727 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOA4P06727 AC243732.1-201ENST00000612648 864 ntBASIC20.4■□□□□ 0.86
APOA4P06727 AL162377.1-201ENST00000618844 1793 ntBASIC20.4■□□□□ 0.86
APOA4P06727 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.4■□□□□ 0.86
APOA4P06727 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.4■□□□□ 0.86
APOA4P06727 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.4■□□□□ 0.86
APOA4P06727 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
APOA4P06727 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
APOA4P06727 RBM17P2-201ENST00000616397 1405 ntBASIC20.39■□□□□ 0.85
APOA4P06727 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.39■□□□□ 0.85
APOA4P06727 AC006015.1-201ENST00000429970 570 ntBASIC20.39■□□□□ 0.85
APOA4P06727 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.39■□□□□ 0.85
APOA4P06727 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.39■□□□□ 0.85
APOA4P06727 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.39■□□□□ 0.85
APOA4P06727 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
APOA4P06727 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOA4P06727 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOA4P06727 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
APOA4P06727 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.39■□□□□ 0.85
APOA4P06727 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
APOA4P06727 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms