Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT6AP02538 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 RBM17P2-201ENST00000616397 1405 ntBASIC19.75■□□□□ 0.75
KRT6AP02538 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
KRT6AP02538 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6AP02538 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.74■□□□□ 0.75
KRT6AP02538 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT6AP02538 MIR2861-201ENST00000636310 90 ntBASIC19.74■□□□□ 0.75
KRT6AP02538 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6AP02538 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6AP02538 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6AP02538 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT6AP02538 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT6AP02538 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6AP02538 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6AP02538 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT6AP02538 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
KRT6AP02538 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6AP02538 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT6AP02538 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6AP02538 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KRT6AP02538 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT6AP02538 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KRT6AP02538 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT6AP02538 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 AC091799.1-201ENST00000422823 811 ntBASIC19.72■□□□□ 0.75
KRT6AP02538 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT6AP02538 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6AP02538 AC019069.1-201ENST00000610008 1333 ntBASIC19.72■□□□□ 0.75
KRT6AP02538 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT6AP02538 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KRT6AP02538 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT6AP02538 AL162377.1-201ENST00000618844 1793 ntBASIC19.71■□□□□ 0.75
KRT6AP02538 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 AC007322.3-201ENST00000426526 701 ntBASIC19.71■□□□□ 0.75
KRT6AP02538 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRT6AP02538 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT6AP02538 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT6AP02538 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms