Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L6-201ENST00000626483 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L1-201ENST00000627662 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L8-201ENST00000629013 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L3-201ENST00000630187 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L7-201ENST00000630678 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 DUX4L5-201ENST00000630834 1275 ntBASIC23.01■■□□□ 1.27
SMC2O95347 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC2O95347 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMC2O95347 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SMC2O95347 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.01■■□□□ 1.27
SMC2O95347 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SMC2O95347 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMC2O95347 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SMC2O95347 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23■■□□□ 1.27
SMC2O95347 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SMC2O95347 AC112907.3-201ENST00000577781 2400 ntBASIC23■■□□□ 1.27
SMC2O95347 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23■■□□□ 1.27
SMC2O95347 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23■■□□□ 1.27
SMC2O95347 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23■■□□□ 1.27
SMC2O95347 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SMC2O95347 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SMC2O95347 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23■■□□□ 1.27
SMC2O95347 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC2O95347 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC2O95347 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC2O95347 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SMC2O95347 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC2O95347 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SMC2O95347 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SMC2O95347 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC2O95347 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 AC123595.1-201ENST00000440769 1046 ntBASIC22.98■■□□□ 1.27
SMC2O95347 AC104187.1-201ENST00000607510 612 ntBASIC22.98■■□□□ 1.27
SMC2O95347 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC2O95347 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC2O95347 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.98■■□□□ 1.27
SMC2O95347 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 AL162377.1-201ENST00000618844 1793 ntBASIC22.97■■□□□ 1.27
SMC2O95347 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.97■■□□□ 1.27
SMC2O95347 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC2O95347 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC2O95347 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SMC2O95347 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC2O95347 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.97■■□□□ 1.27
SMC2O95347 AP001160.3-201ENST00000601484 763 ntBASIC22.97■■□□□ 1.27
SMC2O95347 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.97■■□□□ 1.27
SMC2O95347 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC2O95347 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC2O95347 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.97■■□□□ 1.27
SMC2O95347 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.96■■□□□ 1.27
SMC2O95347 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.96■■□□□ 1.27
SMC2O95347 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SMC2O95347 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SMC2O95347 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 AL512408.1-201ENST00000569378 2000 ntBASIC22.96■■□□□ 1.27
SMC2O95347 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.96■■□□□ 1.27
SMC2O95347 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC2O95347 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
SMC2O95347 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC2O95347 MIR638-201ENST00000385237 100 ntBASIC22.95■■□□□ 1.26
SMC2O95347 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms