Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 MIR1224-201ENST00000408193 85 ntBASIC18.68■□□□□ 0.58
CEACAM4O75871 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.68■□□□□ 0.58
CEACAM4O75871 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.68■□□□□ 0.58
CEACAM4O75871 PRKY-204ENST00000533551 1019 ntBASIC18.68■□□□□ 0.58
CEACAM4O75871 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.68■□□□□ 0.58
CEACAM4O75871 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.68■□□□□ 0.58
CEACAM4O75871 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.68■□□□□ 0.58
CEACAM4O75871 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.68■□□□□ 0.58
CEACAM4O75871 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.68■□□□□ 0.58
CEACAM4O75871 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.68■□□□□ 0.58
CEACAM4O75871 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.68■□□□□ 0.58
CEACAM4O75871 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.67■□□□□ 0.58
CEACAM4O75871 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CEACAM4O75871 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.67■□□□□ 0.58
CEACAM4O75871 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.67■□□□□ 0.58
CEACAM4O75871 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.67■□□□□ 0.58
CEACAM4O75871 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.67■□□□□ 0.58
CEACAM4O75871 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.67■□□□□ 0.58
CEACAM4O75871 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.67■□□□□ 0.58
CEACAM4O75871 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM4O75871 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.67■□□□□ 0.58
CEACAM4O75871 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CEACAM4O75871 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.66■□□□□ 0.58
CEACAM4O75871 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.66■□□□□ 0.58
CEACAM4O75871 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.66■□□□□ 0.58
CEACAM4O75871 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.66■□□□□ 0.58
CEACAM4O75871 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.66■□□□□ 0.58
CEACAM4O75871 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.66■□□□□ 0.58
CEACAM4O75871 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CEACAM4O75871 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.66■□□□□ 0.58
CEACAM4O75871 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM4O75871 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CEACAM4O75871 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.65■□□□□ 0.58
CEACAM4O75871 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.65■□□□□ 0.58
CEACAM4O75871 AC087499.1-201ENST00000418141 1075 ntBASIC18.65■□□□□ 0.58
CEACAM4O75871 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.65■□□□□ 0.58
CEACAM4O75871 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.65■□□□□ 0.58
CEACAM4O75871 TSPY15P-201ENST00000457163 923 ntBASIC18.65■□□□□ 0.58
CEACAM4O75871 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.65■□□□□ 0.58
CEACAM4O75871 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.65■□□□□ 0.58
CEACAM4O75871 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 AC012306.2-201ENST00000609350 630 ntBASIC18.65■□□□□ 0.58
CEACAM4O75871 AL121829.2-201ENST00000620908 328 ntBASIC18.65■□□□□ 0.58
CEACAM4O75871 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.65■□□□□ 0.58
CEACAM4O75871 AC097493.4-201ENST00000641197 219 ntBASIC18.65■□□□□ 0.58
CEACAM4O75871 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CEACAM4O75871 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CEACAM4O75871 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM4O75871 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CEACAM4O75871 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CEACAM4O75871 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
CEACAM4O75871 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.64■□□□□ 0.57
CEACAM4O75871 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CEACAM4O75871 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
CEACAM4O75871 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CEACAM4O75871 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.64■□□□□ 0.57
CEACAM4O75871 AC023632.3-201ENST00000521633 145 ntBASIC18.64■□□□□ 0.57
CEACAM4O75871 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.64■□□□□ 0.57
CEACAM4O75871 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CEACAM4O75871 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM4O75871 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms