Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.23■□□□□ 0.35
PDCD6O75340 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDCD6O75340 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 AC105265.2-201ENST00000467189 838 ntBASIC17.23■□□□□ 0.35
PDCD6O75340 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.23■□□□□ 0.35
PDCD6O75340 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.23■□□□□ 0.35
PDCD6O75340 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDCD6O75340 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.23■□□□□ 0.35
PDCD6O75340 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDCD6O75340 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.22■□□□□ 0.35
PDCD6O75340 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.22■□□□□ 0.35
PDCD6O75340 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 AP001160.3-201ENST00000601484 763 ntBASIC17.22■□□□□ 0.35
PDCD6O75340 AC104187.1-201ENST00000607510 612 ntBASIC17.22■□□□□ 0.35
PDCD6O75340 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDCD6O75340 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDCD6O75340 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.21■□□□□ 0.35
PDCD6O75340 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.21■□□□□ 0.35
PDCD6O75340 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.21■□□□□ 0.35
PDCD6O75340 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
PDCD6O75340 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.21■□□□□ 0.35
PDCD6O75340 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PDCD6O75340 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDCD6O75340 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDCD6O75340 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.2■□□□□ 0.34
PDCD6O75340 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.2■□□□□ 0.34
PDCD6O75340 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.2■□□□□ 0.34
PDCD6O75340 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 SLC7A5P2-201ENST00000553010 536 ntBASIC17.2■□□□□ 0.34
PDCD6O75340 AC005837.3-201ENST00000612163 286 ntBASIC17.2■□□□□ 0.34
PDCD6O75340 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PDCD6O75340 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PDCD6O75340 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDCD6O75340 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDCD6O75340 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.19■□□□□ 0.34
PDCD6O75340 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.19■□□□□ 0.34
PDCD6O75340 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 KRT18P20-201ENST00000548986 1279 ntBASIC17.19■□□□□ 0.34
PDCD6O75340 CCDC92B-201ENST00000575506 885 ntBASIC17.19■□□□□ 0.34
PDCD6O75340 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.19■□□□□ 0.34
PDCD6O75340 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDCD6O75340 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
PDCD6O75340 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.19■□□□□ 0.34
PDCD6O75340 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.19■□□□□ 0.34
PDCD6O75340 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDCD6O75340 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms