Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.71■□□□□ 0.75
CNOT3O75175 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.71■□□□□ 0.75
CNOT3O75175 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.71■□□□□ 0.75
CNOT3O75175 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.71■□□□□ 0.75
CNOT3O75175 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNOT3O75175 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CNOT3O75175 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.71■□□□□ 0.75
CNOT3O75175 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.7■□□□□ 0.74
CNOT3O75175 AC243732.1-201ENST00000612648 864 ntBASIC19.7■□□□□ 0.74
CNOT3O75175 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.7■□□□□ 0.74
CNOT3O75175 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CNOT3O75175 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNOT3O75175 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CNOT3O75175 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CNOT3O75175 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT3O75175 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNOT3O75175 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CNOT3O75175 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CNOT3O75175 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CNOT3O75175 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT3O75175 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CNOT3O75175 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.69■□□□□ 0.74
CNOT3O75175 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.69■□□□□ 0.74
CNOT3O75175 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.69■□□□□ 0.74
CNOT3O75175 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT3O75175 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CNOT3O75175 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT3O75175 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT3O75175 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNOT3O75175 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CNOT3O75175 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.68■□□□□ 0.74
CNOT3O75175 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 AC069152.1-201ENST00000438030 544 ntBASIC19.68■□□□□ 0.74
CNOT3O75175 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT3O75175 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT3O75175 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.68■□□□□ 0.74
CNOT3O75175 OR10C1-204ENST00000622521 1039 ntBASIC19.68■□□□□ 0.74
CNOT3O75175 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CNOT3O75175 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT3O75175 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CNOT3O75175 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.67■□□□□ 0.74
CNOT3O75175 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.67■□□□□ 0.74
CNOT3O75175 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.67■□□□□ 0.74
CNOT3O75175 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.67■□□□□ 0.74
CNOT3O75175 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.67■□□□□ 0.74
CNOT3O75175 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT3O75175 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT3O75175 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms