Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KLHL41O60662 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL41O60662 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
KLHL41O60662 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.19■□□□□ 0.82
KLHL41O60662 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL41O60662 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.19■□□□□ 0.82
KLHL41O60662 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL41O60662 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL41O60662 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL41O60662 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL41O60662 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL41O60662 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.18■□□□□ 0.82
KLHL41O60662 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KLHL41O60662 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL41O60662 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL41O60662 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL41O60662 AC080038.1-201ENST00000611274 1154 ntBASIC20.18■□□□□ 0.82
KLHL41O60662 AL512408.1-201ENST00000569378 2000 ntBASIC20.18■□□□□ 0.82
KLHL41O60662 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KLHL41O60662 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.18■□□□□ 0.82
KLHL41O60662 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.18■□□□□ 0.82
KLHL41O60662 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL41O60662 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
KLHL41O60662 FP700111.2-201ENST00000619190 1892 ntBASIC20.18■□□□□ 0.82
KLHL41O60662 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
KLHL41O60662 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.17■□□□□ 0.82
KLHL41O60662 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KLHL41O60662 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.17■□□□□ 0.82
KLHL41O60662 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.17■□□□□ 0.82
KLHL41O60662 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KLHL41O60662 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KLHL41O60662 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
KLHL41O60662 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL41O60662 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KLHL41O60662 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KLHL41O60662 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.16■□□□□ 0.82
KLHL41O60662 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.16■□□□□ 0.82
KLHL41O60662 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KLHL41O60662 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms