Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GFRA3O60609 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.07■□□□□ 0.8
GFRA3O60609 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.06■□□□□ 0.8
GFRA3O60609 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.06■□□□□ 0.8
GFRA3O60609 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
GFRA3O60609 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GFRA3O60609 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.06■□□□□ 0.8
GFRA3O60609 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.06■□□□□ 0.8
GFRA3O60609 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.06■□□□□ 0.8
GFRA3O60609 AC004264.1-201ENST00000608354 794 ntBASIC20.06■□□□□ 0.8
GFRA3O60609 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.06■□□□□ 0.8
GFRA3O60609 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GFRA3O60609 AL139125.2-201ENST00000623134 1869 ntBASIC20.06■□□□□ 0.8
GFRA3O60609 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.06■□□□□ 0.8
GFRA3O60609 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFRA3O60609 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.05■□□□□ 0.8
GFRA3O60609 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.05■□□□□ 0.8
GFRA3O60609 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.05■□□□□ 0.8
GFRA3O60609 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.05■□□□□ 0.8
GFRA3O60609 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.05■□□□□ 0.8
GFRA3O60609 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFRA3O60609 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.04■□□□□ 0.8
GFRA3O60609 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.04■□□□□ 0.8
GFRA3O60609 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 TSPY14P-201ENST00000303979 915 ntBASIC20.04■□□□□ 0.8
GFRA3O60609 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.04■□□□□ 0.8
GFRA3O60609 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GFRA3O60609 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFRA3O60609 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
GFRA3O60609 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.04■□□□□ 0.8
GFRA3O60609 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
GFRA3O60609 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
GFRA3O60609 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.03■□□□□ 0.8
GFRA3O60609 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 TSPY5P-201ENST00000426936 936 ntBASIC20.03■□□□□ 0.8
GFRA3O60609 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.03■□□□□ 0.8
GFRA3O60609 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.03■□□□□ 0.8
GFRA3O60609 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
GFRA3O60609 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.03■□□□□ 0.8
GFRA3O60609 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GFRA3O60609 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.03■□□□□ 0.8
GFRA3O60609 AC069148.1-201ENST00000608741 768 ntBASIC20.03■□□□□ 0.8
GFRA3O60609 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFRA3O60609 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.02■□□□□ 0.8
GFRA3O60609 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.02■□□□□ 0.8
GFRA3O60609 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.02■□□□□ 0.8
GFRA3O60609 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.02■□□□□ 0.8
GFRA3O60609 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.02■□□□□ 0.8
GFRA3O60609 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.02■□□□□ 0.8
GFRA3O60609 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.02■□□□□ 0.8
GFRA3O60609 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.02■□□□□ 0.8
GFRA3O60609 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFRA3O60609 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GFRA3O60609 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GFRA3O60609 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GFRA3O60609 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
GFRA3O60609 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.02■□□□□ 0.79
GFRA3O60609 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GFRA3O60609 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms