Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNG3O60359 AC060766.5-201ENST00000590539 871 ntBASIC21.11■□□□□ 0.97
CACNG3O60359 HLA-B-256ENST00000639848 1089 ntBASIC21.11■□□□□ 0.97
CACNG3O60359 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CACNG3O60359 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNG3O60359 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CACNG3O60359 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CACNG3O60359 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNG3O60359 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CACNG3O60359 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CACNG3O60359 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNG3O60359 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNG3O60359 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNG3O60359 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CACNG3O60359 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNG3O60359 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNG3O60359 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.09■□□□□ 0.97
CACNG3O60359 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CACNG3O60359 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 AC026366.1-201ENST00000488803 879 ntBASIC21.09■□□□□ 0.97
CACNG3O60359 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CACNG3O60359 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 AC105020.6-201ENST00000621523 1217 ntBASIC21.09■□□□□ 0.97
CACNG3O60359 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.09■□□□□ 0.97
CACNG3O60359 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CACNG3O60359 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 AC121338.2-201ENST00000622535 1744 ntBASIC21.09■□□□□ 0.97
CACNG3O60359 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CACNG3O60359 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 AP003097.1-201ENST00000530657 1135 ntBASIC21.08■□□□□ 0.97
CACNG3O60359 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.08■□□□□ 0.97
CACNG3O60359 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.08■□□□□ 0.97
CACNG3O60359 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CACNG3O60359 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CACNG3O60359 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CACNG3O60359 AC006128.1-201ENST00000624704 1661 ntBASIC21.08■□□□□ 0.96
CACNG3O60359 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CACNG3O60359 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CACNG3O60359 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CACNG3O60359 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CACNG3O60359 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.07■□□□□ 0.96
CACNG3O60359 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.07■□□□□ 0.96
CACNG3O60359 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.07■□□□□ 0.96
CACNG3O60359 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.07■□□□□ 0.96
CACNG3O60359 AC006058.3-201ENST00000606217 1069 ntBASIC21.07■□□□□ 0.96
CACNG3O60359 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.07■□□□□ 0.96
CACNG3O60359 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.07■□□□□ 0.96
CACNG3O60359 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNG3O60359 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.06■□□□□ 0.96
CACNG3O60359 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CACNG3O60359 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.06■□□□□ 0.96
CACNG3O60359 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.06■□□□□ 0.96
CACNG3O60359 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CACNG3O60359 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
CACNG3O60359 AC011484.1-201ENST00000377652 1995 ntBASIC21.06■□□□□ 0.96
CACNG3O60359 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNG3O60359 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNG3O60359 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.05■□□□□ 0.96
CACNG3O60359 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNG3O60359 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CACNG3O60359 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNG3O60359 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNG3O60359 AC087633.2-202ENST00000565166 1439 ntBASIC21.05■□□□□ 0.96
CACNG3O60359 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms