Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNB4O00305 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.2■□□□□ 0.82
CACNB4O00305 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 AC007375.3-201ENST00000600936 2314 ntBASIC20.2■□□□□ 0.82
CACNB4O00305 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CACNB4O00305 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CACNB4O00305 AL356652.1-201ENST00000615962 565 ntBASIC20.2■□□□□ 0.82
CACNB4O00305 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.2■□□□□ 0.82
CACNB4O00305 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CACNB4O00305 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.2■□□□□ 0.82
CACNB4O00305 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CACNB4O00305 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CACNB4O00305 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CACNB4O00305 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 ESRRAP1-201ENST00000400596 1257 ntBASIC20.19■□□□□ 0.82
CACNB4O00305 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CACNB4O00305 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNB4O00305 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.19■□□□□ 0.82
CACNB4O00305 UNC93B5-201ENST00000530315 699 ntBASIC20.19■□□□□ 0.82
CACNB4O00305 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNB4O00305 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.19■□□□□ 0.82
CACNB4O00305 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNB4O00305 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CACNB4O00305 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.19■□□□□ 0.82
CACNB4O00305 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
CACNB4O00305 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CACNB4O00305 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 KRT18P29-201ENST00000397031 1267 ntBASIC20.18■□□□□ 0.82
CACNB4O00305 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.18■□□□□ 0.82
CACNB4O00305 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 C2orf69P4-201ENST00000565394 541 ntBASIC20.18■□□□□ 0.82
CACNB4O00305 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.18■□□□□ 0.82
CACNB4O00305 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNB4O00305 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNB4O00305 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CACNB4O00305 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CACNB4O00305 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CACNB4O00305 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNB4O00305 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB4O00305 ITM2C-210ENST00000620962 501 ntBASIC20.17■□□□□ 0.82
CACNB4O00305 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CACNB4O00305 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CACNB4O00305 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB4O00305 AC092368.3-202ENST00000574180 1591 ntBASIC20.17■□□□□ 0.82
CACNB4O00305 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB4O00305 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CACNB4O00305 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CACNB4O00305 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CACNB4O00305 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CACNB4O00305 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CACNB4O00305 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNB4O00305 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CACNB4O00305 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB4O00305 AC121338.2-201ENST00000622535 1744 ntBASIC20.16■□□□□ 0.82
CACNB4O00305 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
CACNB4O00305 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB4O00305 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms