Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 RARRES2P4-201ENST00000514074 484 ntBASIC18.11■□□□□ 0.49
NPIPB4C9JG80 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 AC016405.3-201ENST00000607710 860 ntBASIC18.11■□□□□ 0.49
NPIPB4C9JG80 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB4C9JG80 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 AC011767.1-201ENST00000617410 1153 ntBASIC18.1■□□□□ 0.49
NPIPB4C9JG80 BID-214ENST00000617586 542 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 AC231657.2-201ENST00000624556 255 ntBASIC18.1■□□□□ 0.49
NPIPB4C9JG80 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB4C9JG80 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 AC068338.2-201ENST00000563278 1430 ntBASIC18.09■□□□□ 0.49
NPIPB4C9JG80 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPB4C9JG80 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPB4C9JG80 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 MCRIP2P1-201ENST00000394346 511 ntBASIC18.08■□□□□ 0.48
NPIPB4C9JG80 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB4C9JG80 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms