Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCP4L1A6NKN8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 AC018695.7-201ENST00000624587 2492 ntBASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.08■□□□□ 0.17
PCP4L1A6NKN8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCP4L1A6NKN8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCP4L1A6NKN8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 AC073314.1-201ENST00000568729 2216 ntBASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCP4L1A6NKN8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PCP4L1A6NKN8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCP4L1A6NKN8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCP4L1A6NKN8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCP4L1A6NKN8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms