Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 AC080038.1-201ENST00000611274 1154 ntBASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 AC010536.3-201ENST00000620306 533 ntBASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 FP700111.2-201ENST00000619190 1892 ntBASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF25A6NGN4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
PRAMEF25A6NGN4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.14■□□□□ 0.66
PRAMEF25A6NGN4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF25A6NGN4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 AC245052.3-201ENST00000450182 901 ntBASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
PRAMEF25A6NGN4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF25A6NGN4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 AC073111.5-205ENST00000641717 521 ntBASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 AC011484.1-201ENST00000377652 1995 ntBASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEF25A6NGN4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms