Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D3FA6NER0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3FA6NER0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3FA6NER0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D3FA6NER0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D3FA6NER0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3FA6NER0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 C1QBPP2-201ENST00000528754 825 ntBASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 FAM197Y4-202ENST00000622692 608 ntBASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 AC011484.1-201ENST00000377652 1995 ntBASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3FA6NER0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 AL359736.2-201ENST00000621992 437 ntBASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.36■□□□□ 0.85
TBC1D3FA6NER0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 RPS2P4-201ENST00000476944 856 ntBASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D3FA6NER0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 UBE2SP1-201ENST00000450587 669 ntBASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 RPPH1-201ENST00000516869 333 ntBASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TBC1D3FA6NER0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms