Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC162PA2VCL2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC162PA2VCL2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 AC020907.5-201ENST00000624372 1936 ntBASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 FAM21FP-204ENST00000608637 956 ntBASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC162PA2VCL2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 AC068338.2-201ENST00000563278 1430 ntBASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC162PA2VCL2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC162PA2VCL2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC162PA2VCL2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC162PA2VCL2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 AL162412.1-201ENST00000567129 965 ntBASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC162PA2VCL2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC162PA2VCL2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms