Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 AL691432.2-201ENST00000607222 2038 ntBASIC17.81■□□□□ 0.44
SHISA3A0PJX4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 AC005224.4-201ENST00000583262 1652 ntBASIC17.81■□□□□ 0.44
SHISA3A0PJX4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHISA3A0PJX4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.8■□□□□ 0.44
SHISA3A0PJX4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHISA3A0PJX4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.79■□□□□ 0.44
SHISA3A0PJX4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 TREX1-205ENST00000625293 1783 ntBASIC17.78■□□□□ 0.44
SHISA3A0PJX4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 NEFHP1-201ENST00000412845 2629 ntBASIC17.78■□□□□ 0.44
SHISA3A0PJX4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHISA3A0PJX4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHISA3A0PJX4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms