Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRBV7-9A0A0J9YWB2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AC092720.2-201ENST00000602388 1665 ntBASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 KRT18P20-201ENST00000548986 1279 ntBASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV7-9A0A0J9YWB2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AC116050.2-201ENST00000612102 1779 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 IRS3P-201ENST00000223076 1006 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L2-201ENST00000561772 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L6-201ENST00000626483 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L1-201ENST00000627662 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L8-201ENST00000629013 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L3-201ENST00000630187 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L7-201ENST00000630678 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 DUX4L5-201ENST00000630834 1275 ntBASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV7-9A0A0J9YWB2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 LINC02228-203ENST00000641970 1355 ntBASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV7-9A0A0J9YWB2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms